Features:
- 10-15 fold lower mutation rate than Taq DNA Polymerase
- high fidelity allele-specific amplification of DNA fragments
- high specificity with lowest background AS-PEX and AS-PCR
- Hot-Start activity for less primer dimers
- only 5'-3' polymerase activity, lack of 5’-exonuclease activity
Applications:
- High specific PCR
- Single Nucleotide Polymorphism (SNP)
- Multiplex PCR
- Real-Time PCR with intercalation dyes
- high fidelity dNTPs and ddNTPs
- Mini-Sequencing, SNP-genotyping
Description:
SNPase is Taq DNA Polymerase with unique N-terminal deletion and proprietary amino acids substitutions introduced into the active center of the enzyme. This modification causes
dramatic increase of sensitivity of the enzyme to mismatches at 3’-end of the primer. Consequently , non-perfect annealing of the primers does not result in unspecific amplicons formation. This
enzyme has only 5'-3' polymerase activity and is recommended for SNP genotyping by allele-specific PCR (AS-PCR), allele-specific primer extension (AS-PEX) and minisequencing
procedures.
Unit definition:
One unit is defined as the amount of enzyme that incorporates 10nmoles of dNTPs into acid-insoluble
form in 30 minutes at 72°C.
Concentration:
20-25 u/µl
Reaction Buffer supplied:
5X Reaction buffer without MgCl2
MgCl2 100 mM
Note:
- optimal MgCl2 concentration: 3.0 -3.5 mM in the 1X reaction mixture
- higher MgCl2 concentrations results in higher yield (up to 4.5 mM)
- lower MgCl2 (2.5 mM) results in higher specificity
- DNA fragments up to 400 bp from Human genomic DNA and 500 bp
from Phage-DNA
Minisequencing SNP genotyping with SNPase DNA Polymerase can be carried out by the procedure described in *:
* Reference for minisequencing protocol: Lovmar L, Fredriksson M, Liljedahl U, Sigurdsson S, Syvänen AC.
Quantitative evaluation by minisequencing and microarrays reveals accurate multiplexed SNP genotyping of whole genome amplified DNA. Nucleic Acids Res. 2003;31:e129.
Components | Volume per reaction |
5X reaction buffer | 5 µl |
MgCl2 | 2.5 - 4 mM |
dNTP-Mix | 0.2 mM each |
primer mix (5 µM stock) | 0,9-1,1 µl (5 pmol) |
Template DNA | 75-125 ng/25 µl genomic DNA |
SNpase (Single Nucleotide Polymorphism) | 0.2 - 0.5 µl (5-12 units) |
Sterile dest. Water (molecular grade) | up to 25 µl total reaction volume |
Step | Time | Temperature |
Initial denaturation | 1-2 min | 94-95°C |
Extension |
20-30 sec
30-40 sec |
94-95°C |
Final extension | 5 min | 72°C |
SNPase is Taq DNA Polymerase with unique N-terminal deletion and proprietary amino acids substitutions introduced into the active center of the enzyme
* availibility of sample size may be limited
Final price excl. shipping costs3
SNPase "Hot-Start" Polymerase