Recognition site:
GGCCGG↑CC
CC↓GGCCGG
Source: Rhizobium yangligense
Assayed on: Adenovirus -2 DNA
Unit definition: One unit of the enzyme is the amount required to hydrolyze 1 μg of Ad2 DNA in 1 hour at 37°C in a total reaction volume of 50 μl.
Optimal SE-buffer: SE-buffer Rig I (10 mM Tris-HCl (pH 8.5 at 25°C); 5 mM MgCl2; 1mM DTT.) + BSA
Activity in SEBuffers:
SEBuffer B 75 -100%
SEBuffer G 50 - 75%
SEBuffer O 0 - 1 0%
SEBuffer W 10 - 25 %
SEBuffer Y 50 - 75%
SEBuffer ROSE 10%
When using a buffer other than the optimal (suppied) SEBuffer, it may be necessary to add more enzyme to achieve complete digestion.
Optimal temperature: 37°C
Storage conditions: 10 mM Tris-HCl (pH 7.5); 100 mM KCl; 0.1 mM EDTA; 7 mM 2-mercaptoethanol; 200 μg/ml BSA; 50% glycerol.
Store at: -20°C.
Store at: -70°C is recommended for periods longer than 7 days.
Ligation: After 3-fold overdigestion with enzyme > 95% of Ad2 DNA fragments can be ligated with T4 DNA Ligase and recut.
Non-specific hydrolisis: No nonspecific activity was detected after incubation of 1 μg of Ad2 DNA with 4 units of enzyme for 16 hours at 37°C.
Reagents supplied with enzyme: 10 X SE-buffer Rig I, BSA
Methylation sensitivity: Blocked by mCG or GmC methylation:
5`-GGC(m5C)GGCC-3`/3`-CCGG(m5C)CGG-5` or
5`-GG(m5C)CGG(m5C)C-3`/3`-C(m5C)GGC(m5C)GG-5`
Inactivation: 20 minutes under 65°C
Notes: Do not use BSA for long incubation. To obtain 100% activity, BSA should be added to the 1 x reaction mix to a final concentration of 100 μg/ml.
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